PROCESSI BIOCHIMICI ED APPLICAZIONI BIOTECNOLOGICHE AGROALIMENTARI

Academic Year 2024/2025 - Teacher: Agatina CAMPISI

Expected Learning Outcomes

Provide knowledge about primary and secondary metabolism in plants and their importance in physiological regulation. Provide specific knowledge of Biochemistry applied to the study of plant response to hormones and biotic and abiotic stresses and on agro-food biotechnology applications. In particular, and with reference to the Dublin Descriptors, the course aims to provide the following knowledge and skills.

Knowledge and understanding

At the end of the course, the student will know, from a biochemical perspective, the main primary and secondary metabolites of plants and microorganisms, their impact on plant productivity and their possible pharmacological and nutritional use.

Ability to apply knowledge and understanding

Individual and group exercises, aimed at verifying the understanding of the concepts covered by the course. Autonomy of judgment Administration of ongoing formative tests aimed at self-assessment of understanding and learning of teaching units already completed; conscious evaluation of teaching.

Communication skills

The student will strengthen the technical language of biochemistry and communication skills through interactions with the teacher and colleagues during the course.

Learning skills

The student will be able to update and expand their knowledge by independently drawing on texts, scientific articles and online platforms.

Course Structure

The course includes 49 hours of frontal lessons (or distance learning) and 14 hours of classroom exercises through presentations and participatory debates among students on research, case studies or topics related to the course topics.

To ensure equal opportunities and in compliance with current laws, interested students can request a personal interview in order to plan any compensatory and/or dispensatory measures, based on the educational objectives and specific needs. It is also possible to contact the CInAP (Center for Active and Participatory Integration - Services for Disabilities and/or DSA) contact teacher of the Department, Prof. Giovanna Tropea Garzia and Prof. Anna De Angelis.

Required Prerequisites

Knowledge of Biology and general Biochemistry.

Attendance of Lessons

Highly recommended.

Detailed Course Content

Carbohydrates, lipids, proteins, nucleic acids.

Main metabolic pathways related to the formation of secondary metabolites (Photosynthesis. Hexose phosphate pool. Synthesis and degradation of sucrose and starch. Triose phosphate/pentose phosphate metabolic pool. Interactions between hexose phosphate and pentose phosphate/triose phosphate pools. Glycolysis, Pentose phosphate pathway, Krebs cycle. Oxidative phosphorylation. Alternative oxidase. Synthesis and catabolism of fatty acids. Symbiotic nitrogen fixation. Absorption and reduction of nitrites and nitrates. Absorption and transport of sulfate. Reductive assimilation pathway of sulfate.).

Phenolic compounds: shikimic acid and aromatic amino acid pathway. Biosynthesis of simple phenols.

Biosynthesis of lignin. Coumarins. Stilbenes, dibenzyls, benzoquinones, naphthoquinones and anthraquinones. Biosynthesis of complex phenols: flavonoids and tannins. Terpenoids.

Mevalonic acid pathway and isoprene biosynthesis.

Monoterpenes, sesquierpenes, diterpenes, triterpenes, tetraterpenes, polyterpenes.

Secondary metabolites containing nitrogen.

Alkaloids. Nicotinic and tropane alkaloids. Isoquinoline alkaloids. Indole alkaloids. Cyanonegetic glucosides. Glucosinolates. Non-protein amino acids.

Overview of the main signal transduction pathways. Secondary metabolites and plant hormones in the adaptation of plants to abiotic and biotic stresses.

Control of phytopathogens by genetic engineering.

Genetic engineering of lipids for the improvement of edible oils.

Biotechnological applications on the biosynthesis of terpenoids and alkaloids.

Metabolic engineering for the production of phenylpropanoids: source of advanced fibers, pigments, pharmaceuticals and flavors.

Textbook Information

Buchanan B.B., Gruissem W., Jones R.L. -Biochemistry Molecular Biology of Plants- Zanichelli.

Maffei – Plant Biochemistry – Piccin.

Taiz, Zeiger – Plant Physiology – Piccin.

Dewick P.M. – Chemistry, Biosynthesis and Bioactivity of Natural Substances- Piccin.

Nelson D.L., Cox M.M. - Lehninger Principles of Biochemistry. VIII Edition- Ed. Zanichelli.

Course Planning

 SubjectsText References
1Carbohydrates, lipids, proteins, nucleic acids.Nelson D.L., Cox M.M. Lehninger Principles of Biochemistry. VIII Edition. Ed. Zanichelli.
2Main metabolic pathways related to the formation of secondary metabolites.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
3Photosynthesis: ilght-dependent and light-independent reactions.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
4Calvin cycle.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
5Photorespiration. C4 and CAM plants.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
6Hexose phosphate pool. Synthesis and degradation of sucrose and starch.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
7Metabolic pool of triose phosphate/pentose phosphate. Interactions between the hexose phosphate and pentose phosphate/triose phosphate pools.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
8Glycolysis.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
9Pentose phosphate pathway.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
10Krebs cycle.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
11Oxidative phosphorylation. Alternative oxidase.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
12Synthesis and catabolism of fatty acids.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
13Symbiotic nitrogen fixation.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
14Absorption and reduction of nitrites and nitrates.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
15Sulfate absorption and transport. Reductive sulfate assimilation pathway.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
16Phenolic compounds: shikimic acid and aromatic amino acid pathway.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
17Biosynthesis of simple phenols.Maffei – Plant Biochemistry – Piccin.
18Biosynthesis of lignin. Coumarins. Stilbenes, dibenzyls, benzoquinones, naphthoquinones and anthraquinones.Maffei – Plant Biochemistry – Piccin.
19Biosynthesis of complex phenols: flavonoids and tannins. Terpenoids.Maffei – Plant Biochemistry – Piccin.
20Mevalonic acid pathway and isoprene biosynthesis.Maffei – Plant Biochemistry – Piccin.
21Monoterpenes, sesquierpenes, diterpenes, triterpenes, tetraterpenes, polyterpenes.Maffei – Plant Biochemistry – Piccin.
22Secondary metabolites containing nitrogen. Alkaloids. Nicotinic and tropane alkaloids.Maffei – Plant Biochemistry – Piccin.
23Isoquinoline alkaloids. Indole alkaloids. Cyanoglycosides. Glucosinolates. Nonprotein amino acids.Maffei – Plant Biochemistry – Piccin.
24Major signal transduction pathways. Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
25Secondary metabolites and plant hormones in plant adaptation to abiotic and biotic stresses.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
26Metabolic engineering for phenylpropanoid production: source of advanced fibers, pigments, pharmaceuticals and flavors.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
27Control of plant pathogens through genetic engineering.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.
28Control of plant pathogens through genetic engineering.Buchanan B.B., Gruissem W and Jones R.L -Biochemistry Molecular Biology of Plants- Zanichelli.

Learning Assessment

Learning Assessment Procedures

The exam will be oral and will focus exclusively on the topics covered in class. The questions are aimed at the reasoned evaluation of the knowledge of the program covered.

The exam dates will be published on the Department website.

Examples of frequently asked questions and / or exercises

1) Description of a metabolic pathway.

2) Function and biosynthesis of plant bioactive metabolites.

3) Biotechnological production and applications of plant bioactive metabolites.